Cities of the Night
1. Cities of the Red Night: A Boy's Book (1981)
2. The Place of Dead Roads (1983)
3. The Western Lands (1987)

Junkie: Confessions of an Unredeemed Drug Addict (1953) (writing as William Lee)
     aka Junky
Naked Lunch (1959)
Exterminator! (1960) (with Brion Gysin)
Minutes To Go (1960) (with Sinclair Beilles, Gregory Corso and Brion Gysin)
The Soft Machine (1961)
The Ticket That Exploded (1962)
Dead Fingers Talk (1963)
Nova Express (1964)
The Last Words of Dutch Schultz: A Fiction in the Form of a Film Script (1970)
The Wild Boys: A Book of the Dead (1971)
Port of Saints (1973)
The Book of Breathing (1980)
     aka Ah Pook is Here
Queer (1985)

Mindfield: New and Selected Poems (poems) (1967)
Ali's Smile / Naked Scientology (1978)
The Third Mind (1978) (with Brion Gysin)
A William Burroughs Reader (1982)
The Burroughs File (1984)
Word Virus: The Selected Writings of William S. Burroughs (1984)
The Adding Machine: Selected Essays (1985)
Interzone (1989)
The Junky's Christmas and Other Stories (1994)

The Yage Letters (1963) (with Allen Ginsberg)
Snack: Two Tape Transcripts (1975) (with Eric Mottram)
Burroughs Live (1977)
The Job: Interviews With William S. Burroughs (1982)
Burroughs: Letters (1988)
My Education: A Book of Dreams (1989)
Last Words: The Final Journals of William S. Boroughs, November 1996-July 1997 (1990)
With William Burroughs: A Report from the Bunker (1991)
Collected Interviews of William S. Burroughs (1993)
The Letters of William S. Burroughs: 1945 to 1959 (1993)
Conversations with William Burroughs (1995)
A Burroughs Compendium: Calling the Toads (1998)
Call Me Burroughs (1998)
Evil River (2006)
Everything Lost: The Latin American Notebook of William S. Burroughs (2007)